Project 5B > SNP Genotyping and Association Study > Association Charts

Association Charts

Quick Links: NR4A1 FASN SREBF1 MEF2C PC GK MYO1C SIRT2 SIRT3

NR4A1

NR4A1
75th percentile

rs876734	Insulin Levels (µU/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
GG	35	7.59	9	5.66
GA	173	37.53	66	41.51
AA	253	54.88	84	52.83
Total	461	100	159	100
			p=	0.55


rs2603763	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
CC	6	1.30	1	0.63
CA	107	23.16	39	24.38
AA	349	75.54	120	75.00
Total	462	100.00	160	100.00
			p=	0.55


rs2242107	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
GG	236	0.49	81	0.48
GA	208	0.43	80	0.47
AA	38	0.08	8	0.05
Total	482	1.00	169	1.00
			p=	0.32


rs1283154	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
GG	47	0.10	18	0.11
GA	189	0.41	68	0.43
AA	223	0.49	73	0.46
Total	459	1.00	159	1.00
			p=	0.83


rs1882119	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
GG	5	0.01	1	0.01
GA	110	0.24	46	0.29
AA	344	0.75	112	0.70
Total	459	1.00	159	1.00
			p=	0.42

rs2272482	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
GG	304	0.63	117	0.68
GT	157	0.32	45	0.26
TT	25	0.05	9	0.05
Total	486	1.00	171	1.00
			p=	0.34

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FASN

FASN
75th percentile

rs4246444	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
GG	253	0.55	79	0.51
GT	165	0.36	63	0.40
TT	44	0.10	14	0.09
Total	462	1.00	156	1.00
			p=	0.58


rs4502283	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
GG	275	0.60	100	0.63
GA	155	0.34	51	0.32
AA	29	0.06	9	0.06
Total	459	1.00	160	1.00
			p=	0.84


rs9905991	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
GG	101	0.22	32	0.20
GA	227	0.49	80	0.51
AA	131	0.29	46	0.29
Total	459	1.00	158	1.00
			p=	0.9

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SREBF1

SREBF1
75th percentile

rs3818717	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
CC	113	0.24	32	0.20
CT	228	0.49	84	0.53
TT	123	0.27	44	0.28
Total	464	1.00	160	1.00
			p=	0.53


rs2297508	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
GG	145	0.31	44	0.28
GC	230	0.50	88	0.55
CC	89	0.19	28	0.18
Total	464	1.00	160	1.00
			p=	0.49


rs9899634	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
AA	142	0.31	41	0.26
AT	224	0.49	88	0.56
TT	95	0.21	29	0.18
Total	461	1.00	158	1.00
			p=	0.3


rs4925118	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
CC	359	0.78	126	0.79
CT	97	0.21	30	0.19
TT	5	0.01	3	0.02
Total	461	1.00	159	1.00
			p=	0.64


rs4925118	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
CC	359	0.78	126	0.79
CT	102	0.22	33	0.21
Total	461	1.00	159	1.00
			p=	0.72
*TT combined with CT

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MEF2C

MEF2C
75th percentile
rs254776	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
GG	36	0.08	16	0.10
GC	218	0.47	60	0.38
CC	205	0.45	82	0.52
Total	459	1.00	158	1.00
			p=	0.11


rs34316	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
GG	109	0.24	54	0.35
GT	271	0.60	69	0.44
TT	74	0.16	33	0.21
Total	454	1.00	156	1.00
			p=	0.03
* This SNP is not in Hardy Weinberg Equilibrium

rs34319	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
AA	77	0.17	36	0.23
AT	259	0.56	65	0.41
TT	128	0.28	58	0.36
Total	464	1.00	159	1.00
			p=	0.01


rs412458	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
GG	25	0.06	7	0.04
GA	183	0.40	58	0.36
AA	246	0.54	94	0.59
Total	454	1.00	159	1.00
			p=	0.54


rs674747	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
CC	14	0.03	6	0.04
CA	150	0.33	42	0.26
AA	296	0.64	111	0.70
Total	460	1.00	159	1.00
			p=	0.33


rs770189	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
GG	213	0.47	72	0.45
GC	210	0.46	68	0.43
CC	35	0.08	19	0.12
Total	458	1.00	159	1.00
			p=	0.25


rs700591	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
CC	163	0.35	52	0.34
CT	241	0.52	70	0.45
TT	57	0.12	33	0.21
Total	461	1.00	155	1.00
			p=	0.02


rs700588	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
GG	209	0.46	75	0.47
GA	213	0.46	64	0.41
AA	37	0.08	19	0.12
Total	459	1.00	158	1.00
			p=	0.22


rs304151	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
GG	30	0.06	14	0.09
GT	200	0.43	63	0.40
TT	234	0.50	82	0.52
Total	464	1.00	159	1.00
			p=	0.53


rs1664496	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
GG	36	0.08	8	0.05
GT	154	0.33	60	0.38
TT	273	0.59	88	0.56
Total	463	1.00	156	1.00
			p=	0.33


rs188582	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
GG	103	0.22	40	0.26
GC	234	0.51	69	0.45
CC	126	0.27	44	0.29
Total	463	1.00	153	1.00
			p=	0.46


rs188581	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
GG	126	0.27	49	0.31
GC	252	0.55	73	0.46
CC	83	0.18	36	0.23
Total	461	1.00	158	1.00
			p=	0.17


rs17560514	Insulin Levels (µunit/ml)
Genotype	<9.2		=>9.2
	n	%	n	%
GG	261	0.57	92	0.58
GA	168	0.37	57	0.36
AA	31	0.07	10	0.06
Total	460	1.00	159	1.00
			p=	0.96

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PC

PC
75th percentile

rs594313	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
TT	150	0.33	46	0.30
CT	239	0.52	70	0.45
CC	72	0.16	39	0.25
Total	461	1.00	155	1.00
			p=	0.03


rs7948839	Insulin Levels (µunit/ml)
	<9.2		=>9.2
	n	%	n	%
CC	214	0.47	71	0.45
CT	206	0.45	66	0.42
TT	40	0.09	21	0.13
Total	460	1.00	158	1.00
			p=	0.24


rs746018	Insulin Levels (µunit/ml)
	<9.2		=>9.2
	n	%	n	%
CC	121	0.26	49	0.31
CT	230	0.50	80	0.50
TT	108	0.24	31	0.19
Total	459	1.00	160	1.00
			p=	0.43


rs7944999	Insulin Levels (µunit/ml)
	<9.2		=>9.2
	n	%	n	%
AA	136	0.30	45	0.29
GA	231	0.51	71	0.46
GG	89	0.20	40	0.26
Total	456	1.00	156	1.00
			p=	0.26


rs7110302	Insulin Levels (µunit/ml)
	<9.2		=>9.2
	n	%	n	%
CC	160	0.35	61	0.39
CT	213	0.46	74	0.47
TT	86	0.19	23	0.15
Total	459	1.00	158	1.00
			p=	0.44


rs2278844	Insulin Levels (µunit/ml)
	<9.2		=>9.2
	n	%	n	%
AA	368	0.79	124	0.78
GA	91	0.20	33	0.21
GG	5	0.01	3	0.02
Total	464	1.00	160	1.00
			p=	0.7

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GK

GK	Male				GK Female
75th percentile

rs6526989	Insulin Levels (µunit/ml)				rs6526989	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2		Genotypes	<9.2		=>9.2
	n	%	n	%		n	%	n	%
GG	53	0.25	30	0.31	GG	14	0.06	2	0.03
GC	6	0.03	0	0.00	GC	96	0.41	25	0.43
CC	155	0.72	66	0.69	CC	125	0.53	31	0.53
Total	214	1.00	96	1.00	Total	235	1.00	58	1.00
			p=	0.15				p=	0.74


rs728149	Insulin Levels (µunit/ml)				rs728149	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2		Genotypes	<9.2		=>9.2
	n	%	n	%		n	%	n	%
GG	24	0.11	14	0.15	GG	1	0.00	0	0.00
GA	1	0.00	2	0.02	GA	45	0.19	9	0.15
AA	191	0.88	80	0.83	AA	186	0.80	51	0.85
Total	216	1.00	96	1.00	Total	232	1.00	60	1.00
			p=	0.26				p=	0.64




rs967785	Insulin Levels (µunit/ml)				rs967785	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2		Genotypes	<9.2		=>9.2
	n	%	n	%		n	%	n	%
GG	80	0.37	29	0.31	GG	17	0.08	4	0.07
GA	2	0.01	1	0.01	GA	111	0.49	19	0.32
AA	133	0.62	64	0.68	AA	97	0.43	36	0.61
Total	215	1.00	94	1.00	Total	225	1.00	59	1.00
			p=	0.56				p=	0.04




rs4077820	Insulin Levels (µunit/ml)				rs4077820	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2		Genotypes	<9.2		=>9.2
	n	%	n	%		n	%	n	%
GG	204	0.93	90	0.94	GG	207	0.87	54	0.92
GT	3	0.01	2	0.02	GT	19	0.08	2	0.03
TT	13	0.06	4	0.04	TT	11	0.05	3	0.05
Total	220	1.00	96	1.00	Total	237	1.00	59	1.00
			p=	0.74				p=	0.46

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MYO1C


MYO1C
75th percentile

rs7504032	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
GG	2	0.00	1	0.01
GA	82	0.18	27	0.18
AA	364	0.81	123	0.81
Total	448	1.00	151	1.00
			p=	0.94


rs7504032	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
GG	84	0.19	28	0.185
GA	364	0.81	123	0.815
Total	448	1.00	151	1.000
			p=	0.96
* AA combined with GA

rs2302459	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
CC	223	0.51	76	0.53
CT	186	0.42	58	0.40
TT	29	0.07	10	0.07
Total	438	1.00	144	1.00
			p=	0.9


rs2302457	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
GG	382	0.84	124	0.78
GT	71	0.16	33	0.21
TT	3	0.01	1	0.01
Total	456	1.00	158	1.00
			p=	0.31

			p=
rs2302457	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
GG	382	0.84	124	0.785
GT	74	0.16	34	0.215
Total	456	1.00	158	1.000
			p=	0.13
*TT combined with GT

rs2286875	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
GG	280	0.61	101	0.63
GT	150	0.33	56	0.35
TT	29	0.06	3	0.02
Total	459	1.00	160	1.00
			p=	0.09


rs11078461	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
CC	87	0.19	43	0.27
CT	233	0.50	74	0.47
TT	143	0.31	41	0.26
Total	463	1.00	158	1.00
			p=	0.07


rs2358973	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
CC	378	0.84	127	0.85
CT	69	0.15	22	0.15
TT	1	0.00	0	0.00
Total	448	1.00	149	1.00
			p=	0.83


rs2358973	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
CC	378	0.84	127	0.852
CT	70	0.16	22	0.148
Total	448	1.00	149	1.000
			p=	0.8
*TT combined with CT

rs4606774	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
GG	143	0.31	65	0.41
GC	231	0.50	66	0.42
CC	85	0.19	28	0.18
Total	459	1.00	159	1.00
			p=	0.07


rs1879488	Insulin Levels (µunit/ml)
Genotypes	<9.2		=>9.2
	n	%	n	%
CC	418	0.91	146	0.913
CA	43	0.09	14	0.088
Total	461	1.00	160	1.000